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ABOUT THIS RECORD

ID: MNEST000489
species: Cucumis melo subsp. melo
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTA

miRNA*
 GATCATATGGTAGCTTCACC

mismatches: 2
bulges: 1
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pre-miRNA
 TGAATCACCAGCAGTTGAAGCTGCCAGCATGATCTAAACTTCTTCTTGCTCTTCACTCAAGCCAAGGAAAGATCAGATCATATGGTAGCTTCACCTTTTG
ATGGTAT

dot-bracket secondary structure
...((((.(((.((.(((((((((((..(((((((...(((.((((((((.........)).)))))))))...))))))).))))))))))).)).)))
.))))..


SIMILARITIES
miRBase tcc-MIR167a: 0.000000000006

PMRD sly-miR167: 0.00000000002

microPC miR167: 8e-39		UniProt no hits

RFAM MIR167_1: 0.0000000001		most similar mature miRNAs

Identical with: miR167 from microPC (MNEST046078)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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