ABOUT THIS RECORDspecies: Cycas rumphii
miRNA family: MIR1314
source: miRNEST
Taxonomy by NCBI:
Cycas rumphii Cycas Cycadaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTCCTTGAATGTTAGGAGA miRNA* TCTTATATTTGAGGATGAGT mismatches: 1 bulges: 1 |
pre-miRNA
GCAAGCTCTTATATTTGAGGATGAGTGCTATTCTAAACATTCTTTAAGACATTCGTCCTTGAATGTTAGGAGAGTGTCTCTC
dot-bracket secondary structure
(((..((((((((((((((((((((((((.................)).)))))))))))))))).))))))..))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCAAGCTCTTATATTTGAGGATGAGTGCTATTCTAAACATTCTTTAAGACATTCGTCCTTGAATGTTAGGAGAGTGTCTCTC
dot-bracket secondary structure
(((..((((((((((((((((((((((((.................)).)))))))))))))))).))))))..))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
