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ABOUT THIS RECORD
ID:
MNEST000535
species:
Cynodon dactylon
miRNA family:
MIRf10
source:
miRNEST
Taxonomy by NCBI:
Cynodon dactylon
Cynodon
Eleusininae
Cynodonteae
Chloridoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTAGGCTTAAAAAATTCGTCT
miRNA*
ACGATTCTATTAAGCCTAATT
mismatches:
5
bulges:
0
View larger
pre-miRNA
TCTTTATATGTTAAATAGGATAACTAAATACAAAACTAATTACACAACTCGATACTACTTCGCGAG
ACGATTCTATTAAGCCTAATT
AAGCTATAATTAG
AAGATGTTTACTGTAGCATCACATTGTCTAATCGTAACCTAA
TTAGGCTTAAAAAATTCGTCT
CGTCATTTAGAGGGGGTTATGGAATAGGTTTTATTAT
TTATCTACGTTTAATATATTTTATTA
dot-bracket secondary structure
.....(((((((((((.((((((.(((....((((((.(((.((.(((((....((.((..(((((
((((.....((((((((((((
(...(((.(((((
(.(((((.............))))).)))))).)))...)))
)))))))))).....))))))
))).....)))).))))).)).))).)))))).))).
))))))..))))))))))).......
SIMILARITIES
miRBase
osa-MIR445a
:
0.00000000005
PMRD
osa-miRf11680-akr
:
0.00000000005
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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