ABOUT THIS RECORDspecies: Dioscorea alata
miRNA family: MIRf521
source: miRNEST
Taxonomy by NCBI:
Dioscorea alata Dioscorea Dioscoreaceae Dioscoreales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTACATGCTCCTTGTTGAGC miRNA* TCGACAAGAAAGGCAAGTGGGTG mismatches: 3 bulges: 2 |
pre-miRNA
GACAACCTATTGCCAAGTGACTTCGACAAGAAAGGCAAGTGGGTGAATGCCTCTCAATTCTACATGCTCCTTGTTGAGCCACTGGACATAGCTGAATA
dot-bracket secondary structure
......((((..(((.(((..(((((((((...((((.(((((.((.......))...))))).)))).))))))))).))))))..)))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GACAACCTATTGCCAAGTGACTTCGACAAGAAAGGCAAGTGGGTGAATGCCTCTCAATTCTACATGCTCCTTGTTGAGCCACTGGACATAGCTGAATA
dot-bracket secondary structure
......((((..(((.(((..(((((((((...((((.(((((.((.......))...))))).)))).))))))))).))))))..)))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
