ABOUT THIS RECORDspecies: Dioscorea alata
miRNA family: miR3705
source: miRNEST
Taxonomy by NCBI:
Dioscorea alata Dioscorea Dioscoreaceae Dioscoreales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAAGTGGTTATGATCTGGCC miRNA* CCTGATCGTGACTCTGTTCT mismatches: 3 bulges: 1 |
pre-miRNA
CATTGCCAAAGAGAAGTGGTTATGATCTGGCCTTGCCTGATCGTGACTCTGTTCTTTCCCGGT
dot-bracket secondary structure
....(((((((((.((.((((((((((.(((...))).)))))))))))).))))))...)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATTGCCAAAGAGAAGTGGTTATGATCTGGCCTTGCCTGATCGTGACTCTGTTCTTTCCCGGT
dot-bracket secondary structure
....(((((((((.((.((((((((((.(((...))).)))))))))))).))))))...)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
