ABOUT THIS RECORDspecies: Dioscorea alata
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Dioscorea alata Dioscorea Dioscoreaceae Dioscoreales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCATCATCATCATCATCATCA miRNA* GTGGTAATGGTGGTGGTGGAG mismatches: 2 bulges: 0 |
pre-miRNA
TGGACACACGCCACCACCATCATCATGCTCACCATCATCATCATCATCATCAACAACAAGAAGGTGGTAATGGTGGTGGTGGAGAGAGTGGAGGTGGAGG
CGGCGGTGAAGA
dot-bracket secondary structure
....(((.((((.((.(((((.((((.(((.(((((((((((((.((((((...........)))))).))))))))))))).))).)))).))))).))
.)))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGACACACGCCACCACCATCATCATGCTCACCATCATCATCATCATCATCAACAACAAGAAGGTGGTAATGGTGGTGGTGGAGAGAGTGGAGGTGGAGG
CGGCGGTGAAGA
dot-bracket secondary structure
....(((.((((.((.(((((.((((.(((.(((((((((((((.((((((...........)))))).))))))))))))).))).)))).))))).))
.)))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
