ABOUT THIS RECORDspecies: Elaeis guineensis
miRNA family: MIR536
source: miRNEST
Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCGTGCCACGCTGTGTGCGT miRNA* GCACATGGCGTGGAACGATCA mismatches: 1 bulges: 0 |
pre-miRNA
TGGACGAGGAGCGAGAGGGGCGCCATGAGACGCACATGGCGTGGAACGATCACCGTCGATCGTGCCACGCTGTGTGCGTCTGATGCGCTCTCTCTGATGT
GACTCCGGA
dot-bracket secondary structure
.....(((..(((((((((((((.((.(((((((((((((((((.((((((......)))))).))))))))))))))))).)))))).))))))..)))
..)))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGACGAGGAGCGAGAGGGGCGCCATGAGACGCACATGGCGTGGAACGATCACCGTCGATCGTGCCACGCTGTGTGCGTCTGATGCGCTCTCTCTGATGT
GACTCCGGA
dot-bracket secondary structure
.....(((..(((((((((((((.((.(((((((((((((((((.((((((......)))))).))))))))))))))))).)))))).))))))..)))
..)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC miR536: 1e-19 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR536 from microPC (MNEST045923) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
