ABOUT THIS RECORDspecies: Eschscholzia californica
miRNA family: MIR847
source: miRNEST
Taxonomy by NCBI:
Eschscholzia californica Eschscholzia Eschscholzioideae Papaveraceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCACTCCTCTTCTTCTTCAAT miRNA* TCGAGAAGAACGAGTTTTG mismatches: 4 bulges: 2 |
pre-miRNA
CGCCAAAGCAATCACTCCTCTTCTTCTTCAATTTCTGCTGATCTAGCTTATTATCTTTGAAAACAGAGCACGTACATACACTCAAAGCTTGTCCCAGGTT
ACCGAAGTTCGAGAAGAACGAGTTTTGGAAGCT
dot-bracket secondary structure
..(((((......((((...((((((((.((((((.(.((((((....((....((((((.....................))))))..))....)))))
).))))))).)))))))).))))))))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGCCAAAGCAATCACTCCTCTTCTTCTTCAATTTCTGCTGATCTAGCTTATTATCTTTGAAAACAGAGCACGTACATACACTCAAAGCTTGTCCCAGGTT
ACCGAAGTTCGAGAAGAACGAGTTTTGGAAGCT
dot-bracket secondary structure
..(((((......((((...((((((((.((((((.(.((((((....((....((((((.....................))))))..))....)))))
).))))))).)))))))).))))))))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
