miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000571
species: Eucalyptus globulus
miRNA family: MIRf760
source: miRNEST

Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGTTGGCAAGTTGTTCTTGGC

miRNA*
 CAAGGATGACTTGCCGACTCT

mismatches: 0
bulges: 0
View larger
pre-miRNA
 GCGTGTAGGTGTCGAAAGCATGTTGTGCAGCCAAGGATGACTTGCCGACTCTCTTTCTTCCTATTTATTTGGATTGGATCTATCTCCGTGTATGTTAAAT
TAATGGAAATAATGAAGTTGGCAAGTTGTTCTTGGCTACATGCTTCTTTCCGCTCCACATGCCA

dot-bracket secondary structure
((((((.((.((.((((((((((.....((((((((((((((((((((((.((.((.((.(((((.((((((..((((......))))......))))))
.))))).)).)).)))))))))))))))))))))))))))))))...))).)).))))))))..


SIMILARITIES
miRBase vvi-MIR169g: 0.0000000005

PMRD vvi-miR169g: 0.0000000005

microPC miR169: 1e-57		UniProt no hits

RFAM MIR169_2: 0.00000001		most similar mature miRNAs

Identical with: miR169 from microPC (MNEST046292)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;