ABOUT THIS RECORDspecies: Eucalyptus globulus
miRNA family: MIRf1473
source: miRNEST
Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGCTCCTCCTTCTTCTTCCA miRNA* GAAGACGAAGGAAGACGACG mismatches: 4 bulges: 1 |
pre-miRNA
ATCATCTCCGAAGCAAGGCGAAGAAGACGAAGGAAGACGACGATGATGGGCGCGTCCTTCGTCTCCACCGTCCCTTCTCTGCTCCCGCTTCAAGCTCAAG
TCGCTCCTCCTTCTTCTTCCACCTCGTCTTCCGCCGCCTC
dot-bracket secondary structure
.((......)).(((((((((.(((((.((((((.((((((((((.((((.(((.....))).)))).)))).(((....((....))...))).....)
))).)).)))))).)))))....)))))))..))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATCATCTCCGAAGCAAGGCGAAGAAGACGAAGGAAGACGACGATGATGGGCGCGTCCTTCGTCTCCACCGTCCCTTCTCTGCTCCCGCTTCAAGCTCAAG
TCGCTCCTCCTTCTTCTTCCACCTCGTCTTCCGCCGCCTC
dot-bracket secondary structure
.((......)).(((((((((.(((((.((((((.((((((((((.((((.(((.....))).)))).)))).(((....((....))...))).....)
))).)).)))))).)))))....)))))))..))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
