ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIRf670
source: miRNEST
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTTCATTCCTCTTCCTAAAA miRNA* TTAGGAAGGGAATGAACGCT mismatches: 0 bulges: 1 |
pre-miRNA
CGACAGCAACGGGTACAGTCCCTCTGAGCACCACGTTGTTCATTCCTCTTCCTAAAATGGCTTCTCTTCATTCTCTGAAAAATCAATTGAATTCATTTTA
GGAAGGGAATGAACGCTGTGCTGGTATCAGAGTGTTATCCTCACATCTGA
dot-bracket secondary structure
...(((....(((.(((....((((((.((.((((.((((((((((.(((((((((((((.(((..((((.....)))).........))).))))))))
))))))))))))))).)))).))...)))))))))...))).....))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGACAGCAACGGGTACAGTCCCTCTGAGCACCACGTTGTTCATTCCTCTTCCTAAAATGGCTTCTCTTCATTCTCTGAAAAATCAATTGAATTCATTTTA
GGAAGGGAATGAACGCTGTGCTGGTATCAGAGTGTTATCCTCACATCTGA
dot-bracket secondary structure
...(((....(((.(((....((((((.((.((((.((((((((((.(((((((((((((.(((..((((.....)))).........))).))))))))
))))))))))))))).)))).))...)))))))))...))).....))).
SIMILARITIES| miRBase no hits PMRD ptc-miRf12236-akr: 0.000000000002 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
