ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIRf351
source: miRNEST
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTCTGGCTTGGAACTTTTGA miRNA* AAATGAAACAAGTCGGATCG mismatches: 5 bulges: 1 |
pre-miRNA
ACCAAACCGGTTCAAATGAAACAAGTCGGATCGGGTTCTCTAACAAAGCCCACGAAACTTTACAGAGGAGTAAGGCAACGACATTGGGGGAAATGGGTCGC
TGAGATCCGGCTCCCAAAGAACCGAACCCGGCTCTGGCTTGGAACTTTTGACACAGCTGA
dot-bracket secondary structure
)......(((((((((.....((((((((((((((((((((......(((......(((((.....)))))..))).......(((((((...((((((..
...)))))).))))))))))...)))))))).))))))))).....)))))....)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ACCAAACCGGTTCAAATGAAACAAGTCGGATCGGGTTCTCTAACAAAGCCCACGAAACTTTACAGAGGAGTAAGGCAACGACATTGGGGGAAATGGGTCGC
TGAGATCCGGCTCCCAAAGAACCGAACCCGGCTCTGGCTTGGAACTTTTGACACAGCTGA
dot-bracket secondary structure
)......(((((((((.....((((((((((((((((((((......(((......(((((.....)))))..))).......(((((((...((((((..
...)))))).))))))))))...)))))))).))))))))).....)))))....)))).
SIMILARITIES| miRBase no hits PMRD ath-miRf10934-akr: 9.0E-12 microPC no hits | UniProt sp|Q9LM15|RA213_ARATH: 3.0E-20 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
