miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000592
species: Euphorbia esula
miRNA family: MIRf420
source: miRNEST

Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GACGAAGAAGATGATGATGGG

miRNA*
 CTTCTTCTTCTTCTTCTTCCA

mismatches: 4
bulges: 0
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pre-miRNA
 TCCGCAGCCATTCTCTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTTTTGTGCCTTTTACTCTGTATATTACTCTTCTCA
AATCCACATTAAGCTTATCTTAGAATTCAACCATGAAGAGCAAAAACCCTAAGAAACGCTCTGCTCCCAAAGGCAACAAGTCTTCAATAAATCAAGATCC
TTTCTTCAGTGCGCAATCCAATAAACGCTCAAAGGTAAATCACAAAGATGACTACATTGACTCCGGTGACTCTGAGGAGGAAAACGGATTCTTAAGCGGC
GGAGAAGAGAAAGATTCCGATGAAGAACAGGAAATAGATCAATTTGCAGATGAGACTGTGAATGAAAAGAAACATCGCCTGGCCAAATCCCTTTTAGACA
AACTCCGAGCGATTGATGGACGACAAAAGGACGAAGAAGATGATGATGGGGAAGATAAAAGGTTTGAGAGGGAAGGGGAGAGGGATACT

dot-bracket secondary structure
.......((.(((((((((((((((((..((((..((((((((.((.((.((((((((.(((...((((((.((..(((.(((((...((.((((((((.
............(((((....(((((((.....((.(((((................)))))(((......)))..))..((((.........))))(((
..(((((((..(((..............((((.(((..(((.....))).)))...)))).....)))...))))))))))....))))))))))))...
.)))))))).))..((((...........)))))))))((.((((((((......)))))))).....))...(((((.(((..................
....))).)))))))).))...))))))))).)))))))).)).)).))))))))...))))...))))))))))))))))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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