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ABOUT THIS RECORD
ID:
MNEST000599
species:
Euphorbia esula
miRNA family:
MIR162
source:
miRNEST
Taxonomy by NCBI:
Euphorbia esula
Euphorbia
Euphorbieae
Euphorbioideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA
miRNA*
GAGGCAGCGGTTCATCGATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTTTTTGAAGGTGAAGTCGCTG
GAGGCAGCGGTTCATCGATC
TCTTCCTGGAGATTTTTTGTTCTGAACTGCAATAAACACATGAATCGA
TCGATAAACC
TCTGCATCCA
GCGCTTATCCTCCTTTTTT
dot-bracket secondary structure
......(((((..(((.(((((
((.((((.((((.(((((((
..(((.((....(((.((((........)))).)))..)).)))..))
))))).))))
.)))).))))
)))))).....)))))...
SIMILARITIES
miRBase
rco-MIR162
:
3e-20
PMRD
rco-miR162
:
7e-18
microPC
miR162
:
4e-47
UniProt
no hits
RFAM
MIR162_2: 1e-16
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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