ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIR157
source: miRNEST
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGACAGAAGAGAGTGAGCAC miRNA* GCTCACTCTCTATCTGTCACCC mismatches: 0 bulges: 1 |
pre-miRNA
AAATGATAAGGGTACAGGGCGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTTCCTGCATATATCATTTTATGCTCGAAGCTATGTGTGCTCACTCTCT
ATCTGTCACCCCCGCCTCTCTCTCTCTCT
dot-bracket secondary structure
........((((....(((.((((((((((((((((((((((.((((((...(((..(((((........)))))..))))))))).)))))))))))))
.))))))))))))....))))........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAATGATAAGGGTACAGGGCGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTTCCTGCATATATCATTTTATGCTCGAAGCTATGTGTGCTCACTCTCT
ATCTGTCACCCCCGCCTCTCTCTCTCTCT
dot-bracket secondary structure
........((((....(((.((((((((((((((((((((((.((((((...(((..(((((........)))))..))))))))).)))))))))))))
.))))))))))))....))))........
SIMILARITIES| miRBase aly-MIR156f: 7e-18 PMRD ath-miR156f: 0.0000000000004 microPC miR156: 2e-43 | UniProt no hits RFAM mir-156: 0.0000000000005 | most similar mature miRNAs |
Identical with: miR156 from microPC (MNEST046354) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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