ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIRf189
source: miRNEST
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTATGTGTGCTCACTCTCTA miRNA* GAGAGTGAGCACCCATGGTCT mismatches: 2 bulges: 0 |
pre-miRNA
CTGAAATGATAAGGGTACAGGGCGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTTCCTGCATATATCATTTTATGCTCGAAGCTATGTGTGCTCACTCT
CTATCTGTCACCCCCGCCTCTCTCTCTCTCTC
dot-bracket secondary structure
)..........((((....(((.((((((((((((((((((((((.((((((...(((..(((((........)))))..))))))))).)))))))))))
)).))))))))))))....)))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTGAAATGATAAGGGTACAGGGCGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTTCCTGCATATATCATTTTATGCTCGAAGCTATGTGTGCTCACTCT
CTATCTGTCACCCCCGCCTCTCTCTCTCTCTC
dot-bracket secondary structure
)..........((((....(((.((((((((((((((((((((((.((((((...(((..(((((........)))))..))))))))).)))))))))))
)).))))))))))))....)))).........
SIMILARITIES| miRBase aly-MIR156f: 7.0E-18 PMRD ath-miR156f: 4.0E-13 microPC miR156: 2.0E-43 | UniProt no hits RFAM 6mir-156: 5.0E-13 | most similar mature miRNAs |
Identical with: miR156 from microPC (MNEST046354) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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