ABOUT THIS RECORDspecies: Fagus sylvatica
miRNA family: MIR395
source: miRNEST
Taxonomy by NCBI:
Fagus sylvatica Fagus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTCCCTTGAACGCTTCACT mismatches: 0 bulges: 0 |
pre-miRNA
AATGAAGTAAGAGTAATAGCTAGCGCATCAGGTGTCCCCTAGAGTTCCCTTGAACGCTTCACTGGGGATTCTCTTTAAACAAGAGGTATACCTACTGAAGT
GTTTGGGGGAACTCCCGGTGTCATTTGATATTATAATACTTCCACAAAGTGCA
dot-bracket secondary structure
)..........(((....))).((((.....))))......((((((((((((((((((((.((((...((((((.....))))))....)))).))))))
))))))))))))))..((((((....))))))....(((((.....)))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATGAAGTAAGAGTAATAGCTAGCGCATCAGGTGTCCCCTAGAGTTCCCTTGAACGCTTCACTGGGGATTCTCTTTAAACAAGAGGTATACCTACTGAAGT
GTTTGGGGGAACTCCCGGTGTCATTTGATATTATAATACTTCCACAAAGTGCA
dot-bracket secondary structure
)..........(((....))).((((.....))))......((((((((((((((((((((.((((...((((((.....))))))....)))).))))))
))))))))))))))..((((((....))))))....(((((.....)))))..
SIMILARITIES| miRBase vvi-MIR395g: 5.0E-13 PMRD vvi-miR395g: 5.0E-13 microPC miR395: 0.0001 | UniProt no hits RFAM 5mir-395: 1.0E-11 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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