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ABOUT THIS RECORD
ID:
MNEST000635
species:
Fagus sylvatica
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Fagus sylvatica
Fagus
Fagaceae
Fagales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA
miRNA*
AAGATGGTGATGTATGGGAAG
mismatches:
1
bulges:
2
View larger
pre-miRNA
TACCACCATCT
TCATCATCATCATCATCATCA
TTAATATTCAGCACCATCCATCGAAATCCCAGGCTGCTTTAGGGCAAGGGTTTTGGGGTTTATTCTTT
GTCTGAGGGAGGGACTGAGGGAGGGACTAAGGAGTTGATG
AAGATGGTGATGTATGGGAAG
TAGAAAAG
dot-bracket secondary structure
.........((
((.((((((((((((((.(((
(((((.((.((..((.(((.(((((((((...(((.......)))..)))))))))(((((.((((((
....)))))).)))))..))).))..)).))..)))))))
).)))))))))).))))))))
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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