miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST000638
species: Festuca arundinacea
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Festuca arundinacea Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGGTACATCCGTATCTAGAT

miRNA*
CAAGATATGGATGTATCTAGT

mismatches: 1
bulges: 0

View larger
pre-miRNA
GTATGTACTCCCTCCGATCCAAATTAATTAACTCTAATTTGTCAAGATATGGATGTATCTAGTCAACAAACGTATCTAGGTACATCCGTATCTAGATAAA
GTGGAGTCAATTAATTTGGATCGGAGGGAGTAACAA


dot-bracket secondary structure
...((((((((((((((((((((((((((.((((((.((((((.((((((((((((((((((...((....))..)))))))))))))))))).))))))
.)))))).))))))))))))))))))))))).))).



SIMILARITIES
miRBase far-MIR1122: 0.0004

PMRD no hits

microPC miR1122: 0.00000000000003
UniProt no hits

RFAM MIR1122: 0.0000005
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;