ABOUT THIS RECORDspecies: Festuca pratensis
miRNA family: MIRf465
source: miRNEST
Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATATGGTCAGTTTTTGGAGGA miRNA* TTCAGGATACTGAAATATGA mismatches: 4 bulges: 1 |
pre-miRNA
TGGGTTCGCACATATGGTCAGTTTTTGGAGGAAAGATTGGAATGCTTCAGGATACTGAAATATGATGTAGAGG
dot-bracket secondary structure
.......((((((((..(((((.(((.((((.............)))).))).))))).))))).))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGGTTCGCACATATGGTCAGTTTTTGGAGGAAAGATTGGAATGCTTCAGGATACTGAAATATGATGTAGAGG
dot-bracket secondary structure
.......((((((((..(((((.(((.((((.............)))).))).))))).))))).))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P94017|CAP9_ARATH: 0.000006 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
