ABOUT THIS RECORDspecies: Festuca pratensis
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTACTCCCTCCGTTCCATAAT miRNA* TATGGATCAGAGAGAGTATTT mismatches: 5 bulges: 0 |
pre-miRNA
ATGATTTGCCAAAAAATTCCTACTCCCTCCGTTCCATAATAAAGGTCATGGTTTTAGTTCAAATCTAAACTAAAACCATGAAACTTATTATGGATCAGAG
AGAGTATTTTTTGTCCCCGAATAGA
dot-bracket secondary structure
...(((((.(((((((....(((((.(((...((((((((((...((((((((((((((........))))))))))))))...))))))))))...)))
.))))))))))))....)))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGATTTGCCAAAAAATTCCTACTCCCTCCGTTCCATAATAAAGGTCATGGTTTTAGTTCAAATCTAAACTAAAACCATGAAACTTATTATGGATCAGAG
AGAGTATTTTTTGTCCCCGAATAGA
dot-bracket secondary structure
...(((((.(((((((....(((((.(((...((((((((((...((((((((((((((........))))))))))))))...))))))))))...)))
.))))))))))))....)))))...
SIMILARITIES| miRBase bdi-MIR5181a: 0.0004 PMRD psa-miR1120: 0.00000000003 microPC miR1132: 0.0000000001 | UniProt no hits RFAM MIR1122: 0.000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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