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ABOUT THIS RECORD

ID: MNEST000685
species: Festuca pratensis
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGGACTGAGGGAGTACT

miRNA*
 TACTTCCTCCGTCCCAATAAG

mismatches: 5
bulges: 0
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pre-miRNA
 GCAGATACCATAGTTAAATCATATACTTCCTCCGTCCCAATAAGTGACTCGGTTTTGTCTAGATACGGTATCTAGACACAGTTTAGCATATCTACAAAAAG
TTGAGTCACTTATTTTGGGACTGAGGGAGTACTATATGTATGAACACTCGCG

dot-bracket secondary structure
)...........(((....(((((((((((((.((((((((((((((((((.((((((..(((((......((((((...))))))..)))))))))))..
.)))))))))))..))))))).)))))))))...))))....))).......


SIMILARITIES
miRBase far-MIR1122: 2.0E-6

PMRD hpr-miR1120: 1.0E-10

microPC miR1439: 1.0E-7		UniProt no hits

RFAM 2MIR1122: 2.0E-9		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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