ABOUT THIS RECORDspecies: Festuca pratensis
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTACTCCCTCCGACCCATAAT miRNA* TATGGTACGGAGGGAGTAGCA mismatches: 3 bulges: 0 |
pre-miRNA
CATTAGAAAGTACTCCCTCCGACCCATAATAAGATGTCATTACAACCAATATACCCATATATTATATTATGGTACGGAGGGAGTAGCAGGTAAC
dot-bracket secondary structure
..........(((((((((((..((((((((.(((((.....................))))).))))))))..))))))))))).........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATTAGAAAGTACTCCCTCCGACCCATAATAAGATGTCATTACAACCAATATACCCATATATTATATTATGGTACGGAGGGAGTAGCAGGTAAC
dot-bracket secondary structure
..........(((((((((((..((((((((.(((((.....................))))).))))))))..))))))))))).........
SIMILARITIES| miRBase osa-MIR1436: 0.00007 PMRD osa-miRf12035-akr: 0.00007 microPC no hits | UniProt no hits RFAM MIR1122: 0.000005 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
