miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST000694
species: Fragaria vesca
miRNA family: MIRf88
source: miRNEST

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATCTTTAGTCTCGGTTGTT

miRNA*
CAAGTTGGGTTATGGATTGAT

mismatches: 1
bulges: 2

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pre-miRNA
ATCATTTGAATCGTGGAATTGATCTTTAGTCTCGGTTGTTCTGCTAGTAGTCGTCAGTTTGCCATTTTTATTTTTATTAAAGTTTGAAGTTTAAGATTGA
AGAAATTTCTATTCCTTTTTTGGTCTGGTGATTCTAGCTTAACAAGTTGGGTTATGGATTGATTTTGTGGGTTCTTTTG


dot-bracket secondary structure
.((....)).(((((((((((((((.(((.((((((((((..(((((.(((((((((...((((..............((((...(((((((........
..))))))).....))))..))))))))))))))))))..))))).)))))))).))))))))))))))).........



SIMILARITIES
miRBase no hits

PMRD osa-miRf11823-akr: 0.0001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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