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ABOUT THIS RECORD

ID: MNEST000701
species: Fragaria vesca
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 ACAGGGACGAGGTAGAGCATG

mismatches: 3
bulges: 0
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pre-miRNA
 TTTCATCTTAGGGGTGAGAACTGAGAGGATTGAAAGAGAGTGATGATAAATAAGACAGGGACGAGGTAGAGCATGGATGGAGTTCCCAACAGAACAGTCAA
GCTGTTGTGGCTCCACTCATGCACTGCCTCTTCCCTGGCTTTGACTCCTCTGGATTTTCTTAACCTCTTTTACGTACTCATCCCATTAGT

dot-bracket secondary structure
).........((((((((.((.((((((...(((((((((.((........(((.((((((.(((((((.((((((.(((((((..((((((.........
.)))))).))))))).)))))).))))))).)))))).)))....))))))...)))))....))))))....)).))))))))......


SIMILARITIES
miRBase vvi-MIR408: 3.0E-9

PMRD ppe-miR408: 3.0E-30

microPC miR408: 4.0E-45		UniProt no hits

RFAM 8MIR408: 1.0E-14		most similar mature miRNAs

Identical with: miR408 from microPC (MNEST045398)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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