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ABOUT THIS RECORD

ID: MNEST000701
species: Fragaria vesca
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCACTGCCTCTTCCCTGGCT

miRNA*
ACAGGGACGAGGTAGAGCATG

mismatches: 3
bulges: 0

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pre-miRNA
TTCATCTTAGGGGTGAGAACTGAGAGGATTGAAAGAGAGTGATGATAAATAAGACAGGGACGAGGTAGAGCATGGATGGAGTTCCCAACAGAACAGTCAA
GCTGTTGTGGCTCCACTCATGCACTGCCTCTTCCCTGGCTTTGACTCCTCTGGATTTTCTTAACCTCTTTTACGTACTCATCCCATTAGT


dot-bracket secondary structure
.........((((((((.((.((((((...(((((((((.((........(((.((((((.(((((((.((((((.(((((((..((((((.........
.)))))).))))))).)))))).))))))).)))))).)))....))))))...)))))....))))))....)).))))))))......



SIMILARITIES
miRBase vvi-MIR408: 0.000000003

PMRD ppe-miR408: 3e-30

microPC miR408: 4e-45
UniProt no hits

RFAM MIR408: 0.00000000000001
most similar mature miRNAs

Identical with: miR408 from microPC (MNEST045398)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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