ABOUT THIS RECORDspecies: Glycyrrhiza uralensis
miRNA family: MIRf789
source: miRNEST
Taxonomy by NCBI:
Glycyrrhiza uralensis Glycyrrhiza Galegeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCAGTTCAATAAAGCTGTGG miRNA* ACAGCTTTCTTGAACTGCATT mismatches: 1 bulges: 0 |
pre-miRNA
TCAATATCATATGGCCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATTCAAAGAGTTCCTTTGCATGCATGCCATGGCACTCTTGCTCCCACCAC
ACCTTGTTTTGCAGTTCAATAAAGCTGTGGGAAGATACAGATAGGGTCAACCATAACGG
dot-bracket secondary structure
...........(((((((.((((((((.((((((((((((.((((((((((..((((((((.((...(((....)))...)).)))))............
...)))...)))))))))).)))))))))))).)))))))).))))))).((.....))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCAATATCATATGGCCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATTCAAAGAGTTCCTTTGCATGCATGCCATGGCACTCTTGCTCCCACCAC
ACCTTGTTTTGCAGTTCAATAAAGCTGTGGGAAGATACAGATAGGGTCAACCATAACGG
dot-bracket secondary structure
...........(((((((.((((((((.((((((((((((.((((((((((..((((((((.((...(((....)))...)).)))))............
...)))...)))))))))).)))))))))))).)))))))).))))))).((.....))
SIMILARITIES| miRBase gma-MIR396a: 1e-53 PMRD gma-miR396a: 1e-53 microPC miR396: 7e-34 | UniProt no hits RFAM MIR396: 0.00000000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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