ABOUT THIS RECORDspecies: Glycyrrhiza uralensis
miRNA family: MIRf879
source: miRNEST
Taxonomy by NCBI:
Glycyrrhiza uralensis Glycyrrhiza Galegeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTGGCAGTGGCAGTGGCAGT miRNA* TCCCACTCCCACTCCCACTCC mismatches: 3 bulges: 0 |
pre-miRNA
CTAACGAACCCCAGTGGCAGTGGCAGTGGCAGTGGCAGCCGCATAAGAGAAGAGAAGAGAAGAAATGGTGGTTGGGCAAGCGGTGCTGCTTAGCGTTGGGG
TGAGAGTTGGAGTGACACCCACACACCTCGTGCCCTTCTGTTCTTTCCGCCGCCCCTCTTCTGCCTCCGCAAACCAGGAACAGGAAGACTCAACCACACC
CACAAGCAGTACCAAACCGAAACCACCATCATCGAGTTTCGGAAGACTAAAAGCCCAGCAAGTGAAGGCTCTCATACACAGAAACAAGCAGCACCAAAGG
CCCTCTCTCCAAGATGAAGATGATGCTGATGATAGACGTTTCAGGGGATGGGGTGATACGGATCCCACTCCCACTCCCACTCCCACTCCCAATCCCC
dot-bracket secondary structure
)...........(((((.(((((.(((((.(((((...(((.((.((......((((.((.((..((((((((.((.....((((((((((.....(((((
((.(((((((((.((((....(((.....)))......))))..))))......(((.((((..............)))).)))..)))))...))).))
)).))))))))))...))..)))))))))).))...))))......))....((...))..(((...(((................)))..))).....(
((((.(((((....(((((......(((....)))...)))))))))).))))).)).)))...))))).))))).))))).)))))..........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTAACGAACCCCAGTGGCAGTGGCAGTGGCAGTGGCAGCCGCATAAGAGAAGAGAAGAGAAGAAATGGTGGTTGGGCAAGCGGTGCTGCTTAGCGTTGGGG
TGAGAGTTGGAGTGACACCCACACACCTCGTGCCCTTCTGTTCTTTCCGCCGCCCCTCTTCTGCCTCCGCAAACCAGGAACAGGAAGACTCAACCACACC
CACAAGCAGTACCAAACCGAAACCACCATCATCGAGTTTCGGAAGACTAAAAGCCCAGCAAGTGAAGGCTCTCATACACAGAAACAAGCAGCACCAAAGG
CCCTCTCTCCAAGATGAAGATGATGCTGATGATAGACGTTTCAGGGGATGGGGTGATACGGATCCCACTCCCACTCCCACTCCCACTCCCAATCCCC
dot-bracket secondary structure
)...........(((((.(((((.(((((.(((((...(((.((.((......((((.((.((..((((((((.((.....((((((((((.....(((((
((.(((((((((.((((....(((.....)))......))))..))))......(((.((((..............)))).)))..)))))...))).))
)).))))))))))...))..)))))))))).))...))))......))....((...))..(((...(((................)))..))).....(
((((.(((((....(((((......(((....)))...)))))))))).))))).)).)))...))))).))))).))))).)))))..........
SIMILARITIES| miRBase dan-mir-289: 9.0E-8 PMRD osa-miRf11026-akr: 5.0E-6 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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