ABOUT THIS RECORDspecies: Gossypium arboreum
miRNA family: miR156e
source: miRNEST
Taxonomy by NCBI:
Gossypium arboreum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTCTCTTCTCTCTCTGTCTC miRNA* GATAGTGAGAAGAGAGGCA mismatches: 2 bulges: 2 |
pre-miRNA
TACCCCCGCGCGCTCTCTTCTCTCTCTGTCTCCTACAGTGCGGGAGAGGACGACACACATTACACACCTCAGNAGCNCTAGCACCNCATCTCTAACAACA
CATGTGACGCANTGCTANCACCGCTATATGATTTATCACACATGCTCACATGCATAGAAGCAGATTGATAGTGAGATAGTGAGAAGAGAGGCACCACGAG
G
dot-bracket secondary structure
.........((.((((((((((...((((((((((((((((....((((.................))))..........))))...((((((.......
(((((((.(((.((..............(((....)))))..))))))))))......)).)))))).))).))))))).))))))))))))........
.
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
TACCCCCGCGCGCTCTCTTCTCTCTCTGTCTCCTACAGTGCGGGAGAGGACGACACACATTACACACCTCAGNAGCNCTAGCACCNCATCTCTAACAACA
CATGTGACGCANTGCTANCACCGCTATATGATTTATCACACATGCTCACATGCATAGAAGCAGATTGATAGTGAGATAGTGAGAAGAGAGGCACCACGAG
G
dot-bracket secondary structure
.........((.((((((((((...((((((((((((((((....((((.................))))..........))))...((((((.......
(((((((.(((.((..............(((....)))))..))))))))))......)).)))))).))).))))))).))))))))))))........
.
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
