ABOUT THIS RECORDspecies: Gossypium arboreum
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Gossypium arboreum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTCGTCATCATCATCATCC miRNA* GTGGTGGTGGTGGCGGCGGCC mismatches: 2 bulges: 0 |
pre-miRNA
GGTTTGAGCCTTGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCCGCCAAGGCGGTGGTTTTAAGATGCATCATGTTTCAAAAGGTGGTCCATATGCTAGGA
TTTTGACTGCTAAAGATTTCCCTTCTTCATCATCATCTTCATCGTCGTCATCATCATCATCCTCACCATCTTTAAGCAAAG
dot-bracket secondary structure
(((....)))..((((((((.(((((((((((((((((((((((((.....))))))...((((((.((.(((......((((.((((.....((.((..
......))))....))))..))))...))).))))))))...))))))))))))))))))).))))))))...........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGTTTGAGCCTTGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCCGCCAAGGCGGTGGTTTTAAGATGCATCATGTTTCAAAAGGTGGTCCATATGCTAGGA
TTTTGACTGCTAAAGATTTCCCTTCTTCATCATCATCTTCATCGTCGTCATCATCATCATCCTCACCATCTTTAAGCAAAG
dot-bracket secondary structure
(((....)))..((((((((.(((((((((((((((((((((((((.....))))))...((((((.((.(((......((((.((((.....((.((..
......))))....))))..))))...))).))))))))...))))))))))))))))))).))))))))...........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
