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ABOUT THIS RECORD

ID: MNEST000760
species: Gossypium hirsutum
miRNA family: MIRf1281
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGTTTGGTTGCTGAGAAAA

miRNA*
 TTCTCAGCAACCAACGGAGG

mismatches: 0
bulges: 1
View larger
pre-miRNA
 ATGCTTGCTTGGATAATTGGATATATATAAGTGGGACTTTGATTTTGCTTTTTGGATGTTTGTGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCAT
AGAAGAGTCATATATAAATATTAACCAGGTTTTTTGGAATTTGGATTCTTTTTAATATATAGTACTAAAATGATGAGTTTTTCAAGAAGGAGGCCTCAAA
AACTTTCCTGTTTGTGTGTGTCTTTTTTTCTAACGTTTTCTCAGCAACCAACGGAGGCTCGAGACGGTCGTGCCGGAAACTTGGCTCCTTGTTGGTACCT
GCGTGGACTACCGTTTGCTGTAATA

dot-bracket secondary structure
..........((((...(((((((.((.((((((((......))))))))..)).)))))))..))))...((((((.(((((((((((((((......(
(((((((.((((((((((((....((((((((....))))))))..((.(((((.(((...))).))))).)).((((((((.....(((...))).)))
)))))...))))))))))))....))))))))..)))))))))))))))))))))(((.(((.....))).)))........(((....((.((((.((.
....)))))).))...)))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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