ABOUT THIS RECORDspecies: Gossypium hirsutum
miRNA family: MIR395
source: miRNEST
Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTCCCCTGATCACTTCACT mismatches: 1 bulges: 0 |
pre-miRNA
CTGTCCTCTTGAGTTCCCCTGATCACTTCACTGGGGTTATGGGGTCTGCTCTTCTCAGAGCCTTGTTAAAGGGGAGGTCCCTGATGACCTACTGAAGTGT
TTGGGGGAACTCTGGCTGCCA
dot-bracket secondary structure
..(.((....((((((((((((.(((((((...(((((((((((....(((((((...(((...)))..)))))))..)))).)))))))..))))))).
)))))))))))).))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTGTCCTCTTGAGTTCCCCTGATCACTTCACTGGGGTTATGGGGTCTGCTCTTCTCAGAGCCTTGTTAAAGGGGAGGTCCCTGATGACCTACTGAAGTGT
TTGGGGGAACTCTGGCTGCCA
dot-bracket secondary structure
..(.((....((((((((((((.(((((((...(((((((((((....(((((((...(((...)))..)))))))..)))).)))))))..))))))).
)))))))))))).))).....
SIMILARITIES| miRBase tcc-MIR395a: 0.000000006 PMRD ghr-miR395d: 6e-37 microPC miR395: 0.00009 | UniProt no hits RFAM mir-395: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
