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ABOUT THIS RECORD
ID:
MNEST000793
species:
Gossypium hirsutum
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTACATTGTGAAACGGAGGGA
miRNA*
CCTCCGTTTCACAATGTAATT
mismatches:
0
bulges:
0
View larger
pre-miRNA
TCTTATACTT
CCTCCGTTTCACAATGTAATT
CATTCTAGCATTTCCCACATTCATATAGTTGTTAATGAATCTGGACGTATTTATCTAGATTCATTAACA
ACTATGTGAATATGGAAAATGCTAGAATGAC
TTACATTGTGAAACGGAGGGA
GTACGTT
dot-bracket secondary structure
.....(((((
(((((((((((((((((((.(
(((((((((((((.(((.(((((((((((((((((((((((((((........))))))))))))))))
))))))))))).))).)))))))))))))).
)))))))))))))))))))))
)))....
SIMILARITIES
miRBase
tae-MIR1132
:
5e-41
PMRD
tae-miR1132
:
5e-41
microPC
miR1132
:
0.000000000002
UniProt
no hits
RFAM
MIR1122: 4e-45
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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