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ABOUT THIS RECORD
ID:
MNEST000818
species:
Gossypium raimondii
miRNA family:
MIRf1281
source:
miRNEST
Taxonomy by NCBI:
Gossypium raimondii
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTGTTTGGTTGCTGAGAAAA
miRNA*
TTCTCAGCAACCAAACGGAGG
mismatches:
0
bulges:
0
View larger
pre-miRNA
TGATCCCCA
TCTGTTTGGTTGCTGAGAAAA
TTAATCATAGAAGAGTCGTATATAAATATTAACCAGGTGTTTTGGAATTTGGATTCTTTTTAATATATAG
TACTAAAATGATGAATTTTTCAAAAAGGAAGCCTCAAAAACTTTCCTGTTTGTGTGTGTTTTTTTTTCTAACGTT
TTCTCAGCAACCAAACGGAGG
CTCA
GA
dot-bracket secondary structure
(((.((...
(((((((((((((((((((((
(......((((((((....(((((.....(((.((((.(((((.((....((.((((((((.........
...........((((...)))))))))))).)))).)))))...)))).)))..)))))...))))))))..)))
)))))))))))))))))))))
.)))
..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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