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ABOUT THIS RECORD

ID: MNEST000846
species: Helianthus ciliaris
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Helianthus ciliaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACGGCTTTCTTGAACTG

miRNA*
 GTTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0
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pre-miRNA
 AACAGCCATAAAAATGGTCCTCTTTCTATTCTTCCACGGCTTTCTTGAACTGCATGGGTTTTGATCTATCAGATCTGTGTTTATCATACAGTCTTTGCGG
TTCAATAAAGCTGTGGGAAGATAGAGACAGGATCAAACCAGAAGAAGC

dot-bracket secondary structure
..............(((((((.((((((((.((((((((((((.((((((((((.(((.(((((....))))).((((((.....))))))))).)))))
))))).)))))))))))).)))))))).))))))).............


SIMILARITIES
miRBase lja-MIR396: 0.0000000001

PMRD ath-miRf11010-akr: 0.000000000008

microPC miR396: 5e-44		UniProt no hits

RFAM MIR396: 0.0000000006		most similar mature miRNAs

Identical with: miR396 from microPC (MNEST045341)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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