ABOUT THIS RECORDspecies: Helianthus petiolaris
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCTTCATCATCATCATCT miRNA* ACGTTGATGATGAAAATGGCT mismatches: 4 bulges: 0 |
pre-miRNA
TACAGGAGGAGGGACGTTGATGATGAAAATGGCTTTACGGTCCTTAGCTTCTAAAGCGGTTCGATCATCTTCATCATCATCATCTAGGGTTTTAT
dot-bracket secondary structure
.......(((..((...((((((((((.((((.....(((.((...((((...)))))).))).)))).)))))))))))).)))..........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TACAGGAGGAGGGACGTTGATGATGAAAATGGCTTTACGGTCCTTAGCTTCTAAAGCGGTTCGATCATCTTCATCATCATCATCTAGGGTTTTAT
dot-bracket secondary structure
.......(((..((...((((((((((.((((.....(((.((...((((...)))))).))).)))).)))))))))))).)))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
