miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD


E. wawaiensis      E. lanceolatusID: MNEST000922
species: Elymus wawawaiensis x Elymus lanceolatus mixed EST library
miRNA family: MIR2504
source: miRNEST







SEQUENCE & STRUCTURE
miRNA
TTGACCAAGTCTATAGAAAAA

miRNA*
ATTCTATAGACTTGGTCAAAC

mismatches: 2
bulges: 0

View larger
pre-miRNA
TAGCTACATACTTCCTCCGTTCGAAATTACTTGGAAGTTCTAGGTTTGTCCCAAGTCAAACAGCTTTATGTTTGACCAAGTCTATAGAAAAATATACCAA
CGTCTACTACATTGACTGTAGTATGAAATATACTATATCATGCACCTAATGAAACTAATATGATTCTATAGACTTGGTCAAACTTAAAGATGTTCGACTT
TGGATAAACCTAGAACTTCAAGTATTTGGAAACGGATAGAGTATGTGAGAT


dot-bracket secondary structure
....(((((((((..((((((...((.((((((.(((((((((((((((((.(((((.((((.(((((.((((((((((((((((((((..((((.....
..((........(((.(((((((((...))))))))))))..........)).....))))..)))))))))))))))))))).))))).)))).)))))
.))))))))))))))))))))))).))...))))))..)))))))))....



SIMILARITIES
miRBase bdi-MIR5169: 0.000000003

PMRD bdi-miR2504b: 0.0000008

microPC miR1128: 0.0002
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;