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ABOUT THIS RECORD
E. wawaiensis E. lanceolatus
ID:
MNEST000922
species:
Elymus wawawaiensis x Elymus lanceolatus mixed EST library
miRNA family:
MIR2504
source:
miRNEST
SEQUENCE & STRUCTURE
miRNA
TTGACCAAGTCTATAGAAAAA
miRNA*
ATTCTATAGACTTGGTCAAAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
TAGCTACATACTTCCTCCGTTCGAAATTACTTGGAAGTTCTAGGTTTGTCCCAAGTCAAACAGCTTTATGT
TTGACCAAGTCTATAGAAAAA
TATACCAA
CGTCTACTACATTGACTGTAGTATGAAATATACTATATCATGCACCTAATGAAACTAATATG
ATTCTATAGACTTGGTCAAAC
TTAAAGATGTTCGACTT
TGGATAAACCTAGAACTTCAAGTATTTGGAAACGGATAGAGTATGTGAGAT
dot-bracket secondary structure
....(((((((((..((((((...((.((((((.(((((((((((((((((.(((((.((((.(((((.((
((((((((((((((((((..(
(((.....
..((........(((.(((((((((...))))))))))))..........)).....)))).
.))))))))))))))))))))
.))))).)))).)))))
.))))))))))))))))))))))).))...))))))..)))))))))....
SIMILARITIES
miRBase
bdi-MIR5169
:
0.000000003
PMRD
bdi-miR2504b
:
0.0000008
microPC
miR1128
:
0.0002
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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