ABOUT THIS RECORD
E. wawaiensis E. lanceolatusID: MNEST000926
species: Elymus wawawaiensis x Elymus lanceolatus mixed EST library
miRNA family: MIRf34
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TTTTGGGGCAGAGGGAGTATA miRNA* TACTTCCTCCGTCCCAAAATA mismatches: 2 bulges: 0 |
pre-miRNA
TAGTCATCCAACAATTAATAGAGTACTTCCTCCGTCCCAAAATAAGTGTCTCAAGCTTAGTACAACTTTGTACTAGCTCTAGTATAAAGTTGAGACACTT
ATTTTGGGGCAGAGGGAGTATATGTTAGCTGATTTGACATCC
dot-bracket secondary structure
..((((.....((.((((((..((((((((((.((((((((((((((((((((...........(((((((((((....)))))))))))))))))))))
)))))))))).)))))))))).)))))).))...))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAGTCATCCAACAATTAATAGAGTACTTCCTCCGTCCCAAAATAAGTGTCTCAAGCTTAGTACAACTTTGTACTAGCTCTAGTATAAAGTTGAGACACTT
ATTTTGGGGCAGAGGGAGTATATGTTAGCTGATTTGACATCC
dot-bracket secondary structure
..((((.....((.((((((..((((((((((.((((((((((((((((((((...........(((((((((((....)))))))))))))))))))))
)))))))))).)))))))))).)))))).))...))))....
SIMILARITIES| miRBase bdi-MIR5180a: 0.00003 PMRD hpr-miR1120: 0.0000000005 microPC miR1439: 9e-30 | UniProt no hits RFAM MIR1122: 1e-26 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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