miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD


E. wawaiensis      E. lanceolatusID: MNEST000930
species: Elymus wawawaiensis x Elymus lanceolatus mixed EST library
miRNA family: MIR1120
source: miRNEST







SEQUENCE & STRUCTURE
miRNA
ACTTCCTCCGTCCCATAATAT

miRNA*
AGTATGGGACGGAGGGAGTAG

mismatches: 1
bulges: 0

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pre-miRNA
AATCAACAAGATACTTCCTCCGTCCCATAATATAAGAGTGTTGCGTTTTTTACTCAAAAACGTTCTTATAATATGTAGTATGGGACGGAGGGAGTAGTATG
CATA


dot-bracket secondary structure
)..........((((((((((((((((((.((((....(((.((((((((.....))))))))....)))...)))).)))))))))))))))))).....
....



SIMILARITIES
miRBase hvu-MIR1120: 5.0E-6

PMRD tae-miR1120: 2.0E-5

microPC miR1436: 2.0E-5
UniProt no hits

RFAM 6MIR806: 4.0E-7
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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