miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
E. wawaiensis E. lanceolatus
ID:
MNEST000930
species:
Elymus wawawaiensis x Elymus lanceolatus mixed EST library
miRNA family:
MIR1120
source:
miRNEST
SEQUENCE & STRUCTURE
miRNA
ACTTCCTCCGTCCCATAATAT
miRNA*
AGTATGGGACGGAGGGAGTAG
mismatches:
1
bulges:
0
View larger
pre-miRNA
ATCAACAAGAT
ACTTCCTCCGTCCCATAATAT
AAGAGTGTTGCGTTTTTTACTCAAAAACGTTCTTATAATATGT
AGTATGGGACGGAGGGAGTAG
TATG
CATA
dot-bracket secondary structure
..........(
(((((((((((((((((.(((
(....(((.((((((((.....))))))))....)))...)))
).)))))))))))))))))).
....
....
SIMILARITIES
miRBase
hvu-MIR1120
:
0.000005
PMRD
tae-miR1120
:
0.00002
microPC
miR1436
:
0.00002
UniProt
no hits
RFAM
MIR806: 0.0000004
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record