ABOUT THIS RECORD
E. wawaiensis E. lanceolatusID: MNEST000931
species: Elymus wawawaiensis x Elymus lanceolatus mixed EST library
miRNA family: MIR1120
source: miRNEST
SEQUENCE & STRUCTURE| miRNA ACTCCCTTCGTCCCATAATGC miRNA* ATTATAGGACAGAGGGAGTAC mismatches: 3 bulges: 0 |
pre-miRNA
CTGGCGATAATAAAATGTACAAAAATGTACTACTCCCTTCGTCCCATAATGCAAGACGTTTTTTACACTACACTGGTGTCAAAAAATCGTCTTACATTAT
AGGACAGAGGGAGTACAAGACTGTAGAAATTAAACCGAGCGTGA
dot-bracket secondary structure
.((....)).......(((((....))))).((((((((.((((.((((((.(((((((((((((((((.....))))).)))))).)))))).))))))
.)))).))))))))..............................
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTGGCGATAATAAAATGTACAAAAATGTACTACTCCCTTCGTCCCATAATGCAAGACGTTTTTTACACTACACTGGTGTCAAAAAATCGTCTTACATTAT
AGGACAGAGGGAGTACAAGACTGTAGAAATTAAACCGAGCGTGA
dot-bracket secondary structure
.((....)).......(((((....))))).((((((((.((((.((((((.(((((((((((((((((.....))))).)))))).)))))).))))))
.)))).))))))))..............................
SIMILARITIES| miRBase tae-MIR1130: 0.0004 PMRD tae-miR1130: 0.0004 microPC miR1436: 0.0000000000001 | UniProt no hits RFAM MIR1122: 6e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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