ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTTCCTAAATATAAGAT miRNA* TTTACTATAGGAACGGAGGT mismatches: 3 bulges: 1 |
pre-miRNA
TGAATTACTCCCTCCGTTCCTAAATATAAGATCTTTTAAAGATTTTACTATAGGAACGGAGGTAGTTTGTT
dot-bracket secondary structure
..(((.(((.((((((((((((....(((((((((...)))))))))...)))))))))))).)))..)))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGAATTACTCCCTCCGTTCCTAAATATAAGATCTTTTAAAGATTTTACTATAGGAACGGAGGTAGTTTGTT
dot-bracket secondary structure
..(((.(((.((((((((((((....(((((((((...)))))))))...)))))))))))).)))..)))
SIMILARITIES| miRBase tae-MIR1126: 0.000003 PMRD osa-miRf11316-akr: 0.00000005 microPC miR1439: 0.0008 | UniProt no hits RFAM MIR1122: 0.000000000004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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