ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTTCCTAAATATAAGAT miRNA* TTTACTATAGGAACGGAGGT mismatches: 3 bulges: 1 |
pre-miRNA
TTGAATTACTCCCTCCGTTCCTAAATATAAGATCTTTTAAAGATTTTACTATAGGAACGGAGGTAGTTTGTT
dot-bracket secondary structure
)..(((.(((.((((((((((((....(((((((((...)))))))))...)))))))))))).)))..)))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGAATTACTCCCTCCGTTCCTAAATATAAGATCTTTTAAAGATTTTACTATAGGAACGGAGGTAGTTTGTT
dot-bracket secondary structure
)..(((.(((.((((((((((((....(((((((((...)))))))))...)))))))))))).)))..)))
SIMILARITIES| miRBase tae-MIR1126: 3.0E-6 PMRD osa-miRf11316-akr: 5.0E-8 microPC miR1439: 0.0008 | UniProt no hits RFAM 2MIR1122: 4.0E-12 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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