ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCGTCCCAAAATAAGTGT miRNA* AGTTATTTTGAGACAGAGGGA mismatches: 4 bulges: 0 |
pre-miRNA
ATGTCAATTCCACTCCGTCCCAAAATAAGTGTCTTAAGCTTAGTACAAATTTATAATAAAGCTAATACAAAGTTGAGACAGTTATTTTGAGACAGAGGGA
GTATATGG
dot-bracket secondary structure
......(((((.(((.(((.((((((((.((((((((.(((.(((....((((...)))).....))).))))))))))).)))))))).))).))))))
))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGTCAATTCCACTCCGTCCCAAAATAAGTGTCTTAAGCTTAGTACAAATTTATAATAAAGCTAATACAAAGTTGAGACAGTTATTTTGAGACAGAGGGA
GTATATGG
dot-bracket secondary structure
......(((((.(((.(((.((((((((.((((((((.(((.(((....((((...)))).....))).))))))))))).)))))))).))).))))))
))......
SIMILARITIES| miRBase no hits PMRD osa-miRf10229-akr: 0.00008 microPC miR1439: 7e-30 | UniProt no hits RFAM MIR1122: 8e-30 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
