ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTGTAAACTAATATAAGAA miRNA* CTTATATTAATTTAAGGAAGG mismatches: 4 bulges: 0 |
pre-miRNA
AACTAAGCTTCCTCTGTAAACTAATATAAGAACGTTTAGAACACTAAAGTAATAAGCTAAACGCTCTTATATTAATTTAAGGAAGGAGTACATA
dot-bracket secondary structure
......(((((.(((.((((.((((((((((.(((((((.................))))))).)))))))))).)))).))).))))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
AACTAAGCTTCCTCTGTAAACTAATATAAGAACGTTTAGAACACTAAAGTAATAAGCTAAACGCTCTTATATTAATTTAAGGAAGGAGTACATA
dot-bracket secondary structure
......(((((.(((.((((.((((((((((.(((((((.................))))))).)))))))))).)))).))).))))).....
SIMILARITIES| miRBase tae-MIR1121: 0.0000003 PMRD tmo-miR1120: 0.000000000005 microPC no hits | UniProt no hits RFAM MIR1122: 6e-21 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
