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ABOUT THIS RECORD
ID:
MNEST000964
species:
Hordeum vulgare
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTGTAAACTAATATAAAAG
miRNA*
TTTATATTAGTTTACGGAGAG
mismatches:
0
bulges:
0
View larger
pre-miRNA
TTTTATGCTAGCTACTACTCC
CTCTGTAAACTAATATAAAAG
TGTTTAGATAACTAAAAGTGCTTTAAATGCT
TTTATATTAGTTTACGGAGAG
AGTATA
AATGTCGGTCTA
dot-bracket secondary structure
......(((.((...(((((.
(((((((((((((((((((((
((((((((..(((...)))..))))))))))
))))))))))))))))))).)
))))..
...)).)))...
SIMILARITIES
miRBase
tae-MIR1121
:
0.00002
PMRD
tur-miR1120
:
0.000001
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 8e-24
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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