ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR2016
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACCCTGAGGCACTCATACC miRNA* TATGAGTGTCTCAGGGTCAAA mismatches: 0 bulges: 0 |
pre-miRNA
TCCCTTCTGGCCAACTGAGTTTGACCCTGAGGCACTCATACCGCTACCTAGTTTGGAATGTTTACCGTATGAATGGCTCAGTTAGCGGTATGAGTGTCTC
AGGGTCAAATTTTGATTGCCGGAAAAA
dot-bracket secondary structure
....(((((((.....((((((((((((((((((((((((((((((......((((..((((((.....))))))..)))).))))))))))))))))))
)))))))))))).....)))))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCCCTTCTGGCCAACTGAGTTTGACCCTGAGGCACTCATACCGCTACCTAGTTTGGAATGTTTACCGTATGAATGGCTCAGTTAGCGGTATGAGTGTCTC
AGGGTCAAATTTTGATTGCCGGAAAAA
dot-bracket secondary structure
....(((((((.....((((((((((((((((((((((((((((((......((((..((((((.....))))))..)))).))))))))))))))))))
)))))))))))).....)))))))...
SIMILARITIES| miRBase no hits PMRD tae-miR2016: 0.0000000004 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
