ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGGAACGAAGTGAGTATA miRNA* TACTCCCTCCGTTCCAAAAGT mismatches: 3 bulges: 0 |
pre-miRNA
CATCAATAATACATACTCCCTCCGTTCCAAAAGTTATTACGATGCCGCGCTTACTTATTTTGGAACGAAGTGAGTATATAATAGTAGG
dot-bracket secondary structure
......((.((.((((((.((.((((((((((.......((......))........)))))))))).)).)))))).)).)).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CATCAATAATACATACTCCCTCCGTTCCAAAAGTTATTACGATGCCGCGCTTACTTATTTTGGAACGAAGTGAGTATATAATAGTAGG
dot-bracket secondary structure
......((.((.((((((.((.((((((((((.......((......))........)))))))))).)).)))))).)).)).....
SIMILARITIES| miRBase no hits PMRD no hits microPC miR1439: 0.0003 | UniProt no hits RFAM MIR1122: 0.0003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
