miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST000982
species: Hordeum vulgare
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTACTCCCTCCGTTCCTAAA

miRNA*
 TAGGAACGGATGGAGTATTTG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TCAACCTTGCTACTACTCCCTCCGTTCCTAAATGTCTTTGTAGAGATTCCACCAAGAACTACACAAGAACTCGGAGCAAAATGAATGGATTTATACTCTA
AAATATGTCTATATACATCCCTATGTAGTTTATAGTAATATCTCTAAAAAGACTTATATTTAGGAACGGATGGAGTATTTGTTAATGAA

dot-bracket secondary structure
(((.....((...((((((.(((((((((((((((((((.(((((((...((...((((((((.........(((......((.((((((.(((......
..))).)))))).))..)))...))))))))...))...))))))).))))))....))))))))))))).))))))...))...))).


SIMILARITIES
miRBase tae-MIR1122: 7e-19

PMRD tae-miR1122: 7e-19

microPC miR1436: 0.000000000000003		UniProt no hits

RFAM MIR1122: 4e-30		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;