ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf1182
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATGCTCATATGCATCACAAT miRNA* TGTGATGCGTATGATAGTATG mismatches: 3 bulges: 0 |
pre-miRNA
CTCCTGGTGCCAATTGTGAATTGTGATGCGTATGATAGTATGGGGAGTAATAACGAATGAATCGTCAAATGCTCATATGCATCACAATTGGCAATCTCAA
GTATATG
dot-bracket secondary structure
......((((..(((((.(((((((((((((((((..((.(((.((...((.....))...)).))).))..))))))))))))))))).))))).....
))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
CTCCTGGTGCCAATTGTGAATTGTGATGCGTATGATAGTATGGGGAGTAATAACGAATGAATCGTCAAATGCTCATATGCATCACAATTGGCAATCTCAA
GTATATG
dot-bracket secondary structure
......((((..(((((.(((((((((((((((((..((.(((.((...((.....))...)).))).))..))))))))))))))))).))))).....
))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
