ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIRf89
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTAGTCCCGGTTGGTAAATA miRNA* TCACCAACCGGGACTAAAAT mismatches: 2 bulges: 1 |
pre-miRNA
ATGCGAGGGCAATTAGTCCCGGTTGGTAAATACAAATCGGGACTAGAGATAGATCTTCGGTCCCGGTTTATATCACCAACCGGGACTAAAATTATCACTA
dot-bracket secondary structure
.(((....))).(((((((((((((((..(((.(((((((((((.((((....)))).))))))))))).))).)))))))))))))))...........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATGCGAGGGCAATTAGTCCCGGTTGGTAAATACAAATCGGGACTAGAGATAGATCTTCGGTCCCGGTTTATATCACCAACCGGGACTAAAATTATCACTA
dot-bracket secondary structure
.(((....))).(((((((((((((((..(((.(((((((((((.((((....)))).))))))))))).))).)))))))))))))))...........
SIMILARITIES| miRBase no hits PMRD osa-miRf11480-akr: 0.000000000005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
